Monday, March 31, 2014

Artificial Amino Acid

This week's assignment challenged us to synthesize our own amino acid. My amino acid is named 2-amino-3-phenyl-butanoic acid and is pictured below:

I would synthesize this amino acid by first reacting 2-phenylpropanol (Chem-Spider) with PCC in order to form an aldehyde which would then be reacted with ammonium chloride and sodium cyanide which would replace the aldehyde with an amino group and a cyano group. This intermediate would then be reacted with hydronium in order to form the final product, 2-amino-3-phenyl-butanoic acid (Williamson). The reaction scheme is pictured below:

We were also challenged to place our artificial amino acid (2-amino-3-phenyl-butanoic acid) within a pentapeptide with four amino acids which exist naturally. The pentapeptide begins with cysteine, continues with glycine, the synthetic amino acid is in the middle, histadine is the fourth amino acid, and the final amino acid is alanine. The pentapeptide is pictured below:
Sources:
Chem Spider. 2-phenylpropanol.  http://www.chemspider.com/Chemical-Structure.13657.html
Smith, J. G. Organic Chemistry, 3rd Ed.; McGraw-Hill: New-York, 2008.

Friday, March 14, 2014

Aromatic Substituion Reactions: Some Biological Examples

Lately, we have been studying electrophilic aromatic substitution reactions. We have studied several examples, learned several mechanisms, and performed brominations in lab. After we have understood and mastered the basics, it is important to make connections from these concepts to the world around us. Therefore, listed below are several examples of electrophilic aromatic substitution reactions which occur biologically and are relevant to our everyday lives.

The first example is of the synthesis of Thyroxine, which occurs within the thyroid:

In these reactions, hydrogen ions in the initial reactant are electrophilically substituted by Iodine. The esterifcation of the alcohol also occurs.

A second example is the drug Prontosil, which is converted by intestinal enzymes into sulfanilamide:
In these reactions, a hydrogen atom attached to the aromatic ring was replaced by a ClSO_2 ion.

A third example of electrophilic aromatic substitution is the biosynthesis of vitamin K, an essential vitamin:
As is observed in the figure, the biosynthesis of vitamin K includes the substitution of an R group for a hydrogen atom.

In conclusion, electrophilic aromatic substitution can be expanded beyond what we have learned in class. In many biologically relevant instances, including the three examples listed, these types of reactions become relevant and important to our everyday life.

Each example and its corresponding figure can be found at the following source:
The Department of Chemistry Turk Group. Electrophilic Aromatic Substitution. http://www.drtchemistry.com/CHM_224_files/Chapter%2016.pdf